single-cell RNA-seq을 통하여 H3K27M gliomas의 세포들을 따로따로 특성을 구별하여 본 논문. 막대한 비용이 들겠지만, 괜찮은 연구 접근 방법이라고 생각된다.1
Category: 03_Study
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Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq.
1.Filbin M, Tirosh I, Hovestadt V, et al. Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq. Science. 2018;360(6386):331-335. [PubMed] -
Gastric dysplasia: the Padova international classification
병원 진단 포맷에 hyperproliferative IM이라는 항목이 있길래 공부하기 위하여 찾아봄.
Padova classification은 다음과 같음.1
TABLE 1. Gastric dysplasia and related lesions: the Padova classification
1. Negative for dysplasia
1.0 Normal
1.1 Reactive foveolar hyperplasia
1.2 Intestinal metaplasia (IM)
1.2.1 IM Complete type
1.2.2 IM Incomplete type
2. Indefinite for dysplasia
2.1 Foveolar hyperproliferation
2.2 Hyperproliferative IM
3. Non-invasive neoplasia (flat or elevated [synonym adenoma])
3.1 Low-grade
3.2 High-grade
3.2.1 Including suspicious for carcinoma without invasion
(intraglandular)
3.2.2 Including carcinoma without invasion
(intraglandular)
4. Suspicious for invasive carcinoma
5. Invasive adenocarcinoma본문 중에서 관련된 설명
In such cases “atypical,” tortuous glandular structures are lined by mucus-depleted epithelial cells with large, hyperchromatic nuclei with thickened nuclear membrane and prominent nucleoli. Mitosis may be prominent. A similar situation arises in patients with intestinal metaplasia, usually with incomplete components in which the deep metaplastic glands are closely packed and lined by large irregular cells with large, hyperchromatic nuclei with frequent mitoses. Some glands show elongated and pseudostratified nuclei. Such lesions have been called “hyperplastic” or “hyperproliferative” or “deep” metaplasia.
1.Rugge M, Correa P, Dixon M, et al. Gastric dysplasia: the Padova international classification. Am J Surg Pathol. 2000;24(2):167-176. [PubMed] -
Clinical and genomic landscape of gastric cancer with a mesenchymal phenotype
위암과 관련된 괜찮은 논문을 하나 봐서 기록에 남김.1
- 여러 병원의 자료를 이용하여 위암의 분자학적 분류가 가능한 방법을 제시하였음.
- Cox 같은 다변량 분석 자료가 없는데.. 그럼에도 불구하고 괜찮은 결과를 이끌어 낸 것 같음. 하지만 Stage 등과 다변량 분석 결과가 없다는 점에서는 compounding factors에 대한 고려가 부족하거나 해봤을 때 의미가 없었을 가능성이 높음.
- 개인적으로는 MP type의 전형적인 histology 같은 것이 더 궁금함.
1.Oh S, Sohn B, Cheong J, et al. Clinical and genomic landscape of gastric cancer with a mesenchymal phenotype. Nat Commun. 2018;9(1):1777. [PubMed]
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Renal tumor, immunohistochemistry
신장 종양의 분류를 위한 IHC 에 대한 논문 모음들.1–4
1.Reuter V, Tickoo S. Differential diagnosis of renal tumours with clear cell histology. Pathology. 2010;42(4):374-383. [PubMed]2.Allory Y, Bazille C, Vieillefond A, et al. Profiling and classification tree applied to renal epithelial tumours. Histopathology. 2008;52(2):158-166. [PubMed]3.Shen S, Truong L, Scarpelli M, Lopez-Beltran A. Role of immunohistochemistry in diagnosing renal neoplasms: when is it really useful? Arch Pathol Lab Med. 2012;136(4):410-417. [PubMed]4.Kuroda N, Tanaka A, Ohe C, Nagashima Y. Recent advances of immunohistochemistry for diagnosis of renal tumors. Pathol Int. 2013;63(8):381-390. [PubMed]